Package: NetPreProc 1.2

NetPreProc: Network Pre-Processing and Normalization

Network Pre-Processing and normalization. Methods for normalizing graphs, including Chua normalization, Laplacian normalization, Binary magnification, min-max normalization and others. Methods to sparsify adjacency matrices. Methods for graph pre-processing and for filtering edges of the graph.

Authors:Giorgio Valentini [aut, cre]

NetPreProc_1.2.tar.gz
NetPreProc_1.2.zip(r-4.5)NetPreProc_1.2.zip(r-4.4)NetPreProc_1.2.zip(r-4.3)
NetPreProc_1.2.tgz(r-4.4-x86_64)NetPreProc_1.2.tgz(r-4.4-arm64)NetPreProc_1.2.tgz(r-4.3-x86_64)NetPreProc_1.2.tgz(r-4.3-arm64)
NetPreProc_1.2.tar.gz(r-4.5-noble)NetPreProc_1.2.tar.gz(r-4.4-noble)
NetPreProc_1.2.tgz(r-4.4-emscripten)NetPreProc_1.2.tgz(r-4.3-emscripten)
NetPreProc.pdf |NetPreProc.html
NetPreProc/json (API)

# Install 'NetPreProc' in R:
install.packages('NetPreProc', repos = c('https://gvalentini58.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

10 exports 0.36 score 2 dependencies 1 dependents 2 scripts 257 downloads

Last updated 2 years agofrom:32b12f3fae. Checks:OK: 9. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 21 2024
R-4.5-win-x86_64OKAug 21 2024
R-4.5-linux-x86_64OKAug 21 2024
R-4.4-win-x86_64OKAug 21 2024
R-4.4-mac-x86_64OKAug 21 2024
R-4.4-mac-aarch64OKAug 21 2024
R-4.3-win-x86_64OKAug 21 2024
R-4.3-mac-x86_64OKAug 21 2024
R-4.3-mac-aarch64OKAug 21 2024

Exports:Binary.matrix.by.threshcheck.networkChua.normDo.sim.matrix.PearsonLaplacian.normMagnify.binary.features.normMax.Min.normProb.normSparsify.matrixSparsify.matrix.fixed.neighbours

Dependencies:BiocGenericsgraph

Readme and manuals

Help Manual

Help pageTopics
NetPreProcNetPreProc-package
Transforming a real-valued network matrix into a binary matrixBinary.matrix.by.thresh Binary.matrix.by.thresh,graph-method Binary.matrix.by.thresh,matrix-method
Graph checkingcheck.network check.network,graph-method check.network,matrix-method
Chua normalizationChua.norm Chua.norm,graph-method Chua.norm,matrix-method
Construction of the Pearson correlation matrixDo.sim.matrix.Pearson
Laplacian graph normalizationLaplacian.norm Laplacian.norm,graph-method Laplacian.norm,matrix-method
Normalization of binary matricesMagnify.binary.features.norm Magnify.binary.features.norm,matrix-method
Max-min graph normalizationMax.Min.norm Max.Min.norm,graph-method Max.Min.norm,matrix-method
Probabilistic normalization of a graphProb.norm Prob.norm,graph-method Prob.norm,matrix-method
Sparsifying the graphSparsify.matrix Sparsify.matrix,graph-method Sparsify.matrix,matrix-method
Sparsifying the graph by a fixed number of edges per nodeSparsify.matrix.fixed.neighbours Sparsify.matrix.fixed.neighbours,graph-method Sparsify.matrix.fixed.neighbours,matrix-method