Package: NetPreProc 1.2

NetPreProc: Network Pre-Processing and Normalization

Network Pre-Processing and normalization. Methods for normalizing graphs, including Chua normalization, Laplacian normalization, Binary magnification, min-max normalization and others. Methods to sparsify adjacency matrices. Methods for graph pre-processing and for filtering edges of the graph.

Authors:Giorgio Valentini [aut, cre]

NetPreProc_1.2.tar.gz
NetPreProc_1.2.zip(r-4.7)NetPreProc_1.2.zip(r-4.6)NetPreProc_1.2.zip(r-4.5)
NetPreProc_1.2.tgz(r-4.6-x86_64)NetPreProc_1.2.tgz(r-4.6-arm64)NetPreProc_1.2.tgz(r-4.5-x86_64)NetPreProc_1.2.tgz(r-4.5-arm64)
NetPreProc_1.2.tar.gz(r-4.7-arm64)NetPreProc_1.2.tar.gz(r-4.7-x86_64)NetPreProc_1.2.tar.gz(r-4.6-arm64)NetPreProc_1.2.tar.gz(r-4.6-x86_64)
NetPreProc_1.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
NetPreProc/json (API)

# Install 'NetPreProc' in R:
install.packages('NetPreProc', repos = c('https://gvalentini58.r-universe.dev', 'https://cloud.r-project.org'))

On CRAN:

Conda:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

1.48 score 1 packages 2 scripts 192 downloads 10 exports 3 dependencies

Last updated from:32b12f3fae. Checks:13 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK117
linux-devel-x86_64OK112
source / vignettesOK124
linux-release-arm64OK111
linux-release-x86_64OK187
macos-release-arm64OK96
macos-release-x86_64OK153
macos-oldrel-arm64OK91
macos-oldrel-x86_64OK169
windows-develOK84
windows-releaseOK124
windows-oldrelOK68
wasm-releaseOK105

Exports:Binary.matrix.by.threshcheck.networkChua.normDo.sim.matrix.PearsonLaplacian.normMagnify.binary.features.normMax.Min.normProb.normSparsify.matrixSparsify.matrix.fixed.neighbours

Dependencies:BiocGenericsgenericsgraph

Readme and manuals

Help Manual

Help pageTopics
NetPreProcNetPreProc-package
Transforming a real-valued network matrix into a binary matrixBinary.matrix.by.thresh Binary.matrix.by.thresh,graph-method Binary.matrix.by.thresh,matrix-method
Graph checkingcheck.network check.network,graph-method check.network,matrix-method
Chua normalizationChua.norm Chua.norm,graph-method Chua.norm,matrix-method
Construction of the Pearson correlation matrixDo.sim.matrix.Pearson
Laplacian graph normalizationLaplacian.norm Laplacian.norm,graph-method Laplacian.norm,matrix-method
Normalization of binary matricesMagnify.binary.features.norm Magnify.binary.features.norm,matrix-method
Max-min graph normalizationMax.Min.norm Max.Min.norm,graph-method Max.Min.norm,matrix-method
Probabilistic normalization of a graphProb.norm Prob.norm,graph-method Prob.norm,matrix-method
Sparsifying the graphSparsify.matrix Sparsify.matrix,graph-method Sparsify.matrix,matrix-method
Sparsifying the graph by a fixed number of edges per nodeSparsify.matrix.fixed.neighbours Sparsify.matrix.fixed.neighbours,graph-method Sparsify.matrix.fixed.neighbours,matrix-method